STRINGSTRING
CGN protein (Latimeria chalumnae) - STRING interaction network
"CGN" - Cingulin in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CGNCingulin (1381 aa)    
Predicted Functional Partners:
TJP2
Tight junction protein 2 (1241 aa)
     
  0.936
TJP1
Tight junction protein 1 (1782 aa)
     
  0.934
TJP3
Tight junction protein 3 (859 aa)
         
  0.851
MYH7B
Myosin, heavy chain 7B, cardiac muscle, beta (1528 aa)
       
  0.824
MYH6
Myosin-6 (1936 aa)
       
  0.824
ENSLACG00000012445
Uncharacterized protein (2203 aa)
       
  0.824
ENSLACG00000012187
Uncharacterized protein (1936 aa)
       
0.823
MYH3
Myosin, heavy chain 3, skeletal muscle, embryonic (1943 aa)
       
0.823
MYH9
Myosin, heavy chain 9, non-muscle (1964 aa)
       
0.823
MYH11
Myosin, heavy chain 11, smooth muscle (1949 aa)
       
0.823
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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