STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC1A3Amino acid transporter. (441 aa)    
Predicted Functional Partners:
SLC3A1
Solute carrier family 3 member 1.
   
 
 0.696
SLC38A4
Solute carrier family 38 member 4.
    
 
 0.679
SLC15A1
Solute carrier family 15 member 1.
   
 
 0.657
SLC7A5
Solute carrier family 7 member 5.
   
  
 0.651
SLC6A19
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
  
  
 0.582
H3A9B7_LATCH
Uncharacterized protein.
   
 
 0.576
SLC38A2
Solute carrier family 38 member 2.
    
 
 0.523
SLC13A3
Solute carrier family 13 member 3.
   
 
 0.510
WAC
WW domain containing adaptor with coiled-coil.
      
 0.506
SLC7A1
Solute carrier family 7 member 1.
      
 0.483
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.