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TBC1D1 protein (Latimeria chalumnae) - STRING interaction network
"TBC1D1" - TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D1TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 (431 aa)    
Predicted Functional Partners:
RABGAP1L
RAB GTPase activating protein 1-like (503 aa)
 
 
  0.771
ENSLACG00000002578
Uncharacterized protein (254 aa)
 
 
  0.771
RAB8A
Ras-related protein Rab-8A (598 aa)
       
  0.746
RAB8B
RAB8B, member RAS oncogene family (206 aa)
       
  0.725
RAB13
RAB13, member RAS oncogene family (178 aa)
       
  0.720
RAB14
RAB14, member RAS oncogene family (234 aa)
     
  0.686
TBC1D30
TBC1 domain family, member 30 (742 aa)
     
  0.670
TBC1D25
TBC1 domain family, member 25 (634 aa)
     
  0.646
TBC1D17
TBC1 domain family, member 17 (653 aa)
     
  0.641
RAB10
RAB10, member RAS oncogene family (201 aa)
       
  0.636
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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