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STRINGSTRING
ZMYND11 protein (Latimeria chalumnae) - STRING interaction network
"ZMYND11" - Zinc finger, MYND-type containing 11 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMYND11Zinc finger, MYND-type containing 11 (577 aa)    
Predicted Functional Partners:
ENSLACG00000001795
Selenoprotein H (112 aa)
       
 
  0.882
H3F3C
H3 histone, family 3C (109 aa)
     
 
  0.870
ENSLACG00000008380
annotation not available (129 aa)
     
 
  0.870
H3F3B
H3 histone, family 3A (136 aa)
       
 
  0.821
H3F3A
H3 histone, family 3A (136 aa)
       
 
  0.821
ENSLACG00000001043
annotation not available (136 aa)
       
 
  0.821
NCOR1
Nuclear receptor corepressor 1 (2480 aa)
     
 
  0.814
C11orf30
EMSY, BRCA2 interacting transcriptional repressor; Chromosome 11 open reading frame 30 (1197 aa)
     
 
  0.808
ENSLACG00000004350
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (103 aa)
       
      0.785
EFTUD2
Elongation factor Tu GTP binding domain containing 2 (971 aa)
       
 
  0.678
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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