STRINGSTRING
TRAK1 protein (Latimeria chalumnae) - STRING interaction network
"TRAK1" - Trafficking protein, kinesin binding 1 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAK1Trafficking protein, kinesin binding 1 (853 aa)    
Predicted Functional Partners:
NLK
Nemo-like kinase (382 aa)
       
      0.683
ENSLACG00000006362
Uncharacterized protein (336 aa)
       
      0.683
RHOT1
Ras homolog family member T1; Mitochondrial GTPase involved in mitochondrial trafficking (673 aa)
     
 
  0.601
RHOT2
Ras homolog family member T2; Mitochondrial GTPase involved in mitochondrial trafficking (589 aa)
     
 
  0.601
DCTN5
Dynactin 5 (p25) (156 aa)
       
      0.585
OGT
O-linked N-acetylglucosamine (GlcNAc) transferase (1048 aa)
       
 
  0.428
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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