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TRPC4 protein (Latimeria chalumnae) - STRING interaction network
"TRPC4" - Transient receptor potential cation channel, subfamily C, member 4 in Latimeria chalumnae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRPC4Transient receptor potential cation channel, subfamily C, member 4 (760 aa)    
Predicted Functional Partners:
ACTN1
Actinin, alpha 1 (890 aa)
       
  0.727
ACTN3
Actinin, alpha 3 (907 aa)
       
  0.727
ACTN2
Actinin, alpha 2 (879 aa)
       
  0.727
STIM1
Stromal interaction molecule 1 (662 aa)
       
  0.694
STIM2
Stromal interaction molecule 2 (639 aa)
       
  0.598
TRPA1
Transient receptor potential cation channel, subfamily A, member 1 (1138 aa)
     
   
  0.596
TRPV4
Transient receptor potential cation channel, subfamily V, member 4 (870 aa)
     
   
  0.517
MYO3A
Myosin IIIA (600 aa)
     
   
  0.497
ITPR3
Inositol 1,4,5-trisphosphate receptor, type 3 (2675 aa)
       
  0.494
ITPR2
Inositol 1,4,5-trisphosphate receptor, type 2 (1923 aa)
       
  0.494
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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