STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAF10DDB1 and CUL4 associated factor 10. (504 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.991
TTC37
Tetratricopeptide repeat domain 37.
    
 0.808
H3A117_LATCH
Helicase ATP-binding domain-containing protein.
    
 0.784
DCAF5
DDB1 and CUL4 associated factor 5.
     
 0.780
CDC73
Cell division cycle 73.
    
 0.764
DDB1
Damage specific DNA binding protein 1.
    
 0.755
ERCC8
ERCC excision repair 8, CSA ubiquitin ligase complex subunit.
    
 0.753
PAF1
PAF1 homolog, Paf1/RNA polymerase II complex component.
   
 0.734
WDTC1
WD and tetratricopeptide repeats 1.
   
 
 0.731
DCAF4
WD repeat domain 21.
     
 0.712
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.