STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBS4Bardet-Biedl syndrome 4. (537 aa)    
Predicted Functional Partners:
H3A6Z7_LATCH
Bardet-Biedl syndrome 1.
   
 0.998
BBS9
Bardet-Biedl syndrome 9.
   
 0.998
BBS2
Bardet-Biedl syndrome 2 protein homolog.
   
 0.998
BBS7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
    
 0.997
TTC8
Tetratricopeptide repeat domain 8.
   
0.997
BBS9-2
PHTB1_C domain-containing protein.
   
 0.970
LZTFL1
Leucine zipper transcription factor like 1.
   
 0.901
BBS5
Bardet-Biedl syndrome 5 protein homolog; Required for ciliogenesis; Belongs to the BBS5 family.
    
 0.897
KLHL41
Kelch like family member 41.
    
 0.897
KLHL40
Kelch like family member 40.
    
 0.893
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (20%) [HD]