Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102356562Sulfotransferase; Belongs to the sulfotransferase 1 family. (394 aa)    
Predicted Functional Partners:
KERA
Keratocan.
     
 0.866
LUM
Lumican.
     
 0.810
CHST13
Carbohydrate sulfotransferase.
   
  
 0.649
NTAN1
N-terminal asparagine amidase.
      
 0.641
ST3GAL6
ST3 beta-galactoside alpha-2,3-sialyltransferase 6; Belongs to the glycosyltransferase 29 family.
      
 0.641
OGN
Osteoglycin.
     
 0.634
UBIAD1
UbiA prenyltransferase domain containing 1.
      
 0.610
CHST12
Carbohydrate sulfotransferase.
      
 0.604
FAM210B
Family with sequence similarity 210 member B.
   
  
 0.602
WDR64
WD repeat domain 64.
   
  
 0.599
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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