STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS50VPS50 subunit of EARP/GARPII complex. (964 aa)    
Predicted Functional Partners:
VPS51
VPS51 subunit of GARP complex.
    
 0.992
VPS53
VPS53 subunit of GARP complex.
    
 
 0.992
VPS52
VPS52 subunit of GARP complex.
   
 
 0.945
EIPR1
EARP complex and GARP complex interacting protein 1.
    
 
 0.908
VPS54
VPS54 subunit of GARP complex.
   
 
 0.895
GAK
J domain-containing protein.
   
  
 0.702
CCDC186
Coiled-coil domain containing 186.
      
 0.692
H2ZU76_LATCH
Uncharacterized protein.
      
 0.612
DYM
Dymeclin.
   
  
 0.611
HEPACAM2
HEPACAM family member 2.
 
    
 0.591
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.