STRINGSTRING
CAPN2 protein (Latimeria chalumnae) - STRING interaction network
"CAPN2" - Calpain 2, in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPN2Calpain 2, (m/II) large subunit (578 aa)    
Predicted Functional Partners:
CAPNS1
Calpain, small subunit 1 (269 aa)
     
0.886
TLN2
Talin 2 (1962 aa)
     
  0.869
TLN1
Talin 1 (2546 aa)
     
  0.869
BAK1
BCL2-antagonist/killer 1 (239 aa)
     
  0.825
CAPN1
Calpain 1, (mu/I) large subunit (642 aa)
         
0.802
ENSLACG00000011168
Uncharacterized protein (208 aa)
         
    0.800
BAX
BCL2-associated X protein (223 aa)
         
    0.800
PTPN23
Protein tyrosine phosphatase, non-receptor type 23 (1414 aa)
     
  0.612
CHMP4C
Charged multivesicular body protein 4C (240 aa)
     
 
  0.595
CHMP4B
Charged multivesicular body protein 4B (225 aa)
     
 
  0.595
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
Server load: low (6%) [HD]