STRINGSTRING
CAPN2 protein (Latimeria chalumnae) - STRING interaction network
"CAPN2" - Calpain 2, in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPN2Calpain 2, (m/II) large subunit; Belongs to the peptidase C2 family (578 aa)    
Predicted Functional Partners:
CAST
Uncharacterized protein; Calpastatin (667 aa)
     
 
  0.969
TLN1
Talin 1 (2546 aa)
     
  0.884
TLN2
Talin 2a (1962 aa)
       
  0.859
BAX
BCL2 associated X, apoptosis regulator; BCL2-associated X protein (223 aa)
       
  0.810
BAK1
BCL2-antagonist/killer 1 (239 aa)
     
  0.809
ENSLACG00000011168
annotation not available (208 aa)
         
    0.800
CIAPIN1
Cytokine induced apoptosis inhibitor 1 (228 aa)
           
  0.646
RBP1
Retinol binding protein 1, cellular; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family (135 aa)
           
  0.632
UXT
Ubiquitously-expressed, prefoldin-like chaperone (155 aa)
           
  0.591
ZMAT3
Zinc finger, matrin-type 3 (363 aa)
           
  0.561
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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