Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TCF20Transcription factor 20. (1869 aa)    
Predicted Functional Partners:
BRD1
Bromodomain containing 1.
   
 
 0.850
PHF14
PHD finger protein 14.
   
 
 0.765
SBF1
SET binding factor 1.
   
 
 0.712
SBF2
SET binding factor 2.
   
 
 0.712
RAI1
Retinoic acid induced 1.
    
 
 0.699
GATAD2B
GATA zinc finger domain containing 2B.
   
 0.692
QRICH1
Glutamine rich 1.
      
 0.691
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.645
ZDHHC5
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.640
LOC102351003
Choline kinase beta.
      
 0.640
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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