Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
H2ZXL9_LATCHIg-like domain-containing protein. (160 aa)    
Predicted Functional Partners:
SLITRK1
SLIT and NTRK like family member 1.
   
 0.668
NGEF
Neuronal guanine nucleotide exchange factor.
      
 0.668
GABRA5
Gamma-aminobutyric acid type A receptor alpha5 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
 
 0.655
KCNAB3
Potassium voltage-gated channel subfamily A regulatory beta subunit 3.
   
 
 0.644
KCNF1
Potassium voltage-gated channel modifier subfamily F member 1; Belongs to the potassium channel family.
   
  
 0.642
LOC102345690
Zgc:175088.
    
   0.549
FGFR3
Fibroblast growth factor receptor.
   
 0.524
IGLON5
IgLON family member 5.
   
 
 0.485
CAPZB
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
     
 0.478
KCNH8
Uncharacterized protein.
      
 0.471
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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