Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102355973Si:dkeyp-120h9.1. (681 aa)    
Predicted Functional Partners:
H3A9B7_LATCH
Uncharacterized protein.
   
 0.776
LOC102352322
Aamy domain-containing protein.
   
 0.776
SLC3A1
Solute carrier family 3 member 1.
   
 0.703
SLC7A1
Solute carrier family 7 member 1.
  
 
 0.572
H3AA72_LATCH
Si:ch211-153b23.3.
   
 0.565
SLC7A4
Solute carrier family 7 member 4.
  
 
 0.522
SLC7A3
Solute carrier family 7 member 3.
  
 
 0.512
LOC102350594
AA_permease_C domain-containing protein.
  
 
 0.503
SLC7A14
Solute carrier family 7 member 14.
  
 
 0.477
KIAA0513
KIAA0513.
   
 0.419
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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