STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102355973Si:dkeyp-120h9.1. (681 aa)    
Predicted Functional Partners:
H3A9B7_LATCH
Uncharacterized protein.
   
 0.750
LOC102352322
Aamy domain-containing protein.
   
 0.750
SLC3A1
Solute carrier family 3 member 1.
   
 0.686
SLC7A1
Solute carrier family 7 member 1.
  
 
 0.540
SLC7A3
Solute carrier family 7 member 3.
  
 
 0.521
SLC7A4
Solute carrier family 7 member 4.
  
 
 0.521
LOC102350594
AA_permease_C domain-containing protein.
  
 
 0.512
SLC7A14
Solute carrier family 7 member 14.
  
 
 0.487
KIAA0513
KIAA0513.
   
 0.481
ALKBH2
AlkB homolog 2, alpha-ketoglutarate dependent dioxygenase.
   
 0.481
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.