STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2ZXM4_LATCHEGF-like domain-containing protein. (580 aa)    
Predicted Functional Partners:
H3ABR4_LATCH
Uncharacterized protein.
 
      0.895
LOC102367052
Uncharacterized protein.
 
   
 
0.728
ITSN2
Intersectin 2.
    
 0.656
LDLRAP1
Low density lipoprotein receptor adaptor protein 1b.
    
 0.605
RELN
Reelin.
    
 0.603
PCSK9
Proprotein convertase subtilisin/kexin type 9.
    
 0.583
H3A5Z1_LATCH
Uncharacterized protein.
 
     
0.580
LOC102358266
Dickkopf WNT signaling pathway inhibitor 1b.
    
 0.575
KREMEN1
Kringle containing transmembrane protein 1.
    
 0.567
H3BFA3_LATCH
NtA domain-containing protein.
    
 0.564
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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