Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2ZXM7_LATCHUncharacterized protein. (583 aa)    
Predicted Functional Partners:
H2ZWC4_LATCH
Integrase catalytic domain-containing protein.
 
     0.502
H2ZRT1_LATCH
Integrase catalytic domain-containing protein.
 
     0.447
FANCM
FA complementation group M.
    
  0.446
H3AWX4_LATCH
RT_RNaseH domain-containing protein.
  
     0.432
H3BCP7_LATCH
Integrase catalytic domain-containing protein.
  
     0.421
H3ACW4_LATCH
Integrase catalytic domain-containing protein.
  
     0.412
H3AII3_LATCH
Uncharacterized protein.
  
     0.408
H3AST2_LATCH
Uncharacterized protein.
  
     0.405
H3A6B2_LATCH
Integrase catalytic domain-containing protein.
  
     0.404
H2ZSA4_LATCH
Integrase catalytic domain-containing protein.
  
     0.401
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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