Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KIAA0355KIAA0355. (1082 aa)    
Predicted Functional Partners:
LRATD1
LRAT domain containing 1.
      
 0.717
DOP1B
DOP1 leucine zipper like protein B.
      
 0.715
NCKAP1
NCK associated protein 1.
    
  0.702
NCKAP1L
NCK associated protein 1 like.
    
  0.702
ABI1
Abl interactor 1.
    
  0.643
DOCK4
Dedicator of cytokinesis 4; Belongs to the DOCK family.
    
 0.623
PKNOX1
PBX/knotted 1 homeobox 1.
   
  
 0.604
LOC102362077
Ras homolog gene family, member Gc.
   
 
  0.602
RHOG
Ras homolog family member G.
   
 
  0.602
H3AG99_LATCH
Dopey_N domain-containing protein.
      
 0.600
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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