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PTPRZ1 protein (Latimeria chalumnae) - STRING interaction network
"PTPRZ1" - Protein tyrosine phosphatase, receptor-type, Z polypeptide 1 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPRZ1Protein tyrosine phosphatase, receptor-type, Z polypeptide 1 (2273 aa)    
Predicted Functional Partners:
CNTN2
Contactin 2 (axonal) (1026 aa)
     
 
  0.822
L1CAM
L1 cell adhesion molecule (1176 aa)
     
 
  0.821
CHL1
Cell adhesion molecule with homology to L1CAM (close homolog of L1) (1280 aa)
     
 
  0.821
CNTN1
Contactin 1 (1009 aa)
     
 
  0.818
NFASC
Neurofascin (1339 aa)
     
 
  0.816
NRCAM
Neuronal cell adhesion molecule (1302 aa)
     
 
  0.816
CNTN5
Contactin 5 (669 aa)
     
 
  0.813
CNTN3
Contactin 3 (plasmacytoma associated) (1027 aa)
     
 
  0.813
CNTN4
Contactin 4 (543 aa)
     
 
  0.810
UBA52
Uncharacterized protein (128 aa)
       
  0.673
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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