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SARDH protein (Latimeria chalumnae) - STRING interaction network
"SARDH" - Sarcosine dehydrogenase in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARDHSarcosine dehydrogenase (876 aa)    
Predicted Functional Partners:
GLDC
Glycine dehydrogenase (decarboxylating) (914 aa)
   
 
  0.999
GCSH
Glycine cleavage system protein H (aminomethyl carrier) (177 aa)
   
  0.987
SHMT2
Serine hydroxymethyltransferase 2 (mitochondrial); Interconversion of serine and glycine (542 aa)
   
  0.971
SHMT1
Serine hydroxymethyltransferase 1 (soluble); Interconversion of serine and glycine (474 aa)
   
  0.971
DMGDH
Dimethylglycine dehydrogenase (750 aa)
 
0.954
DAO
D-amino-acid oxidase (347 aa)
   
  0.937
ENSLACG00000017532
Uncharacterized protein (417 aa)
     
  0.935
AGXT
Alanine-glyoxylate aminotransferase (426 aa)
     
 
  0.929
AGXT2
Alanine--glyoxylate aminotransferase 2 (516 aa)
   
 
  0.908
GATM
Glycine amidinotransferase (L-arginine-glycine amidinotransferase) (266 aa)
     
 
  0.905
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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