STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102348752Microtubule associated tumor suppressor 1a. (330 aa)    
Predicted Functional Partners:
SAV1
Salvador family WW domain containing protein 1.
    
 0.904
LATS2
Large tumor suppressor kinase 2.
    
 0.717
LATS1
Large tumor suppressor kinase 1.
    
 0.717
LOC102361521
Uncharacterized protein.
   
 0.704
LOC102357456
Uncharacterized protein.
   
 0.704
LOC102350996
MOB kinase activator 1A.
   
 0.704
LOC102363737
Uncharacterized protein.
   
 0.685
RASSF6
Ras association domain family member 6.
    
 0.508
RASSF2
Ras association domain family member 2.
    
 0.508
RASSF5
Ras association domain family member 5.
    
 0.508
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.