STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102358478Uncharacterized protein. (429 aa)    
Predicted Functional Partners:
MFSD10
Major facilitator superfamily domain containing 10.
      
 0.487
MFSD6
Major facilitator superfamily domain containing 6.
      
 0.475
MFSD12
Major facilitator superfamily domain containing 12.
      
 0.471
MFSD5
Major facilitator superfamily domain containing 5.
      
 0.469
MFSD8
Major facilitator superfamily domain containing 8.
   
  
 0.433
DNPEP
Aspartyl aminopeptidase; Belongs to the peptidase M18 family.
      
 0.426
MFSD13A
Major facilitator superfamily domain containing 13A.
      
 0.426
MFSD6L
Major facilitator superfamily domain containing 6 like.
      
 0.424
MFSD9
Major facilitator superfamily domain containing 9.
      
 0.420
SVOPL
SVOP like.
      
 0.420
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.