Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102358478Uncharacterized protein. (429 aa)    
Predicted Functional Partners:
MFSD5
Major facilitator superfamily domain containing 5.
      
 0.640
MFSD13A
Major facilitator superfamily domain containing 13A.
      
 0.591
MFSD3
Uncharacterized protein.
      
 0.587
SVOPL
SVOP like.
      
 0.579
MFSD9
Major facilitator superfamily domain containing 9.
      
 0.568
MFSD10
Major facilitator superfamily domain containing 10.
      
 0.563
MFSD6
Major facilitator superfamily domain containing 6.
      
 0.549
MFSD12
Major facilitator superfamily domain containing 12.
      
 0.528
MFSD6L
Major facilitator superfamily domain containing 6 like.
      
 0.522
METTL23
Methyltransferase like 23.
      
 0.512
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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