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UBA1 protein (Latimeria chalumnae) - STRING interaction network
"UBA1" - Ubiquitin-like modifier activating enzyme 1 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBA1Ubiquitin-like modifier activating enzyme 1 (1059 aa)    
Predicted Functional Partners:
UBA52
Uncharacterized protein (128 aa)
     
  0.982
KXD1
Ubiquitin A-52 residue ribosomal protein fusion product 1 (231 aa)
     
  0.955
UBE2N
Ubiquitin-conjugating enzyme E2N (159 aa)
     
  0.927
UBE2D3
Ubiquitin-conjugating enzyme E2D 3 (118 aa)
     
  0.921
UBE2D1
Ubiquitin-conjugating enzyme E2D 1 (147 aa)
     
  0.921
UBE2D2
Ubiquitin-conjugating enzyme E2D 2 (146 aa)
     
  0.921
RPS27A
Ribosomal protein S27a (156 aa)
     
  0.913
ENSLACG00000006419
Uncharacterized protein (152 aa)
     
  0.888
UBE2B
Ubiquitin-conjugating enzyme E2B (152 aa)
     
  0.888
UBE2A
Ubiquitin-conjugating enzyme E2A (152 aa)
     
  0.888
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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