STRINGSTRING
SZT2 protein (Latimeria chalumnae) - STRING interaction network
"SZT2" - annotation not available in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SZT2annotation not available (3053 aa)    
Predicted Functional Partners:
WDR59
WD repeat domain 59 (967 aa)
       
 
  0.963
SEH1L
SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family (468 aa)
       
 
  0.957
WDR24
WD repeat domain 24 (790 aa)
     
 
  0.952
MIOS
Missing oocyte, meiosis regulator, homolog (Drosophila) (877 aa)
       
 
  0.952
DEPDC5
DEP domain containing 5 (1603 aa)
     
 
  0.948
NPRL2
NPR2 like, GATOR1 complex subunit; Nitrogen permease regulator-like 2 (S. cerevisiae) (380 aa)
       
 
  0.946
ITFG2
Integrin alpha FG-GAP repeat containing 2 (445 aa)
       
 
  0.938
NPRL3
NPR3 like, GATOR1 complex subunit; Nitrogen permease regulator-like 3 (S. cerevisiae) (396 aa)
       
 
  0.934
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component; SEC13 homolog (S. cerevisiae); Belongs to the WD repeat SEC13 family (320 aa)
       
 
  0.916
LAMP2
Lysosomal-associated membrane protein 2 (416 aa)
       
 
  0.912
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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