STRINGSTRING
STAMBP protein (Latimeria chalumnae) - STRING interaction network
"STAMBP" - STAM binding protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STAMBPSTAM binding protein (450 aa)    
Predicted Functional Partners:
PIP5K1A
Phosphatidylinositol-4-phosphate 5-kinase, type I, alpha (878 aa)
     
  0.912
PSMD6
Proteasome (prosome, macropain) 26S subunit, non-ATPase, 6 (389 aa)
     
  0.874
PSMD12
Proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 (455 aa)
     
  0.846
PSMD3
Proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 (524 aa)
     
  0.834
PSMD8
Proteasome (prosome, macropain) 26S subunit, non-ATPase, 8 (309 aa)
     
  0.827
PSMA2
Proteasome subunit alpha 2; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH (234 aa)
     
  0.822
PSMA3
Proteasome (prosome, macropain) subunit, alpha type, 3; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH (259 aa)
     
  0.818
PSMB4
Proteasome (prosome, macropain) subunit, beta type, 4; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (274 aa)
     
  0.815
HACE1
HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 (916 aa)
     
  0.815
COPS4
COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis) (422 aa)
     
  0.815
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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