Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
STAMBPSTAM binding protein. (450 aa)    
Predicted Functional Partners:
STAM
Signal transducing adaptor molecule.
    
 0.944
STAM2
Signal transducing adaptor molecule 2.
    
 0.939
GAK
J domain-containing protein.
    
  0.923
RPS27A
Ribosomal protein S27a.
   
 0.903
CHMP2A
Charged multivesicular body protein 2A.
   
 
 0.810
LOC102356960
Charged multivesicular body protein 3.
    
 
 0.800
GRB2
Growth factor receptor bound protein 2.
   
  0.778
GRAP2
GRB2 related adaptor protein 2.
   
  0.775
CLINT1
Clathrin interactor 1.
    
   0.737
BMP2K
BMP2 inducible kinase.
    
   0.729
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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