Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GEMIN5Gem nuclear organelle associated protein 5. (1009 aa)    
Predicted Functional Partners:
GEMIN4
Gem nuclear organelle associated protein 4.
   
 0.999
GEMIN8
Gem nuclear organelle associated protein 8.
    
 0.999
DDX20
DEAD-box helicase 20.
   
 0.999
GEMIN2
Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.
    
 0.998
LOC102361814
Tudor domain-containing protein.
   
 0.993
STRAP
Serine/threonine kinase receptor associated protein.
    
 0.982
LOC102367397
Uncharacterized protein.
    
 0.979
GEMIN7
Gem (nuclear organelle) associated protein 7.
    
 0.979
SNRPE
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.976
H2ZZC6_LATCH
Sm domain-containing protein.
    
 0.974
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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