STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GEMIN5Gem nuclear organelle associated protein 5. (1009 aa)    
Predicted Functional Partners:
DDX20
DEAD-box helicase 20.
   
 0.994
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.992
GEMIN8
Gem nuclear organelle associated protein 8.
    
 0.984
GEMIN4
Gem nuclear organelle associated protein 4.
   
 0.975
LOC102361814
Tudor domain-containing protein.
   
 0.967
GEMIN2
Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.
    
 0.956
SPATA6L
SPATA6 domain-containing protein.
    
 0.887
LOC102367397
Uncharacterized protein.
    
 0.848
GEMIN7
Gem (nuclear organelle) associated protein 7.
    
 0.848
TTC37
Tetratricopeptide repeat domain 37.
    
 0.808
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: medium (52%) [HD]