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LIG3 protein (Latimeria chalumnae) - STRING interaction network
"LIG3" - Ligase III, DNA, ATP-dependent in Latimeria chalumnae
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIG3Ligase III, DNA, ATP-dependent (960 aa)    
Predicted Functional Partners:
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (260 aa)
     
  0.946
ENSLACG00000008590
REV3-like, polymerase (DNA directed), zeta, catalytic subunit (2836 aa)
     
  0.848
POLD1
Polymerase (DNA directed), delta 1, catalytic subunit (1103 aa)
     
  0.844
ENSLACG00000006378
Uncharacterized protein (649 aa)
     
  0.833
POLE
Polymerase (DNA directed), epsilon, catalytic subunit (2289 aa)
     
  0.820
ENSLACG00000010676
Uncharacterized protein (238 aa)
     
  0.817
POLA1
Uncharacterized protein (630 aa)
     
  0.817
XRCC4
X-ray repair complementing defective repair in Chinese hamster cells 4 (331 aa)
       
  0.790
XRCC5
X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) (606 aa)
     
  0.788
FEN1
Flap structure-specific endonuclease 1; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminat [...] (317 aa)
     
  0.783
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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