STRINGSTRING
LUC7L2 protein (Latimeria chalumnae) - STRING interaction network
"LUC7L2" - LUC7-like 2 (S. cerevisiae) in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LUC7L2LUC7-like 2 (S. cerevisiae) (398 aa)    
Predicted Functional Partners:
SNRNP70
Small nuclear ribonucleoprotein 70kDa (U1) (457 aa)
     
 
  0.953
PRPF19
PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae) (504 aa)
     
 
  0.931
CDC40
Cell division cycle 40 homolog (S. cerevisiae) (574 aa)
     
 
  0.930
SNRNP35
Small nuclear ribonucleoprotein 35kDa (U11/U12) (279 aa)
     
 
  0.902
PRPF40B
PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae) (894 aa)
     
 
  0.894
PRPF40A
PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) (902 aa)
     
 
  0.894
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide 16.5kDa (108 aa)
     
 
  0.864
SF3B3
Splicing factor 3b, subunit 3, 130kDa (1205 aa)
     
 
  0.863
SNRPD3
Small nuclear ribonucleoprotein D3 polypeptide 18kDa (126 aa)
     
 
  0.859
SNRPD1
Small nuclear ribonucleoprotein D1 polypeptide 16kDa (121 aa)
     
 
  0.853
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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