Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DLX1Distal-less homeobox 1. (253 aa)    
Predicted Functional Partners:
DLX2
Distal-less homeobox 2.
   
 
 0.873
IRX1
Iroquois homeobox 1.
   
 
 0.799
LHX6
LIM homeobox 6.
   
 
 0.706
TBR1
T-box brain transcription factor 1.
   
 
 0.699
MEIS2
Meis homeobox 2.
    
 
 0.686
ZNF646
Uncharacterized protein.
    
 
 0.685
DACH1
Dachshund family transcription factor 1.
      
 0.639
PBX2
Homeobox domain-containing protein.
   
 
 0.638
H3AM53_LATCH
PBC domain-containing protein.
   
 
 0.638
PBX1
PBX homeobox 1.
   
 
 0.638
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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