STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DLX1Distal-less homeobox 1. (253 aa)    
Predicted Functional Partners:
DLX2
Distal-less homeobox 2.
   
 
0.798
IRX2
Iroquois homeobox 2.
   
 
 0.591
ASCL1
Achaete-scute family bHLH transcription factor 1.
   
  
 0.590
LHX6
LIM homeobox 6.
   
  
 0.569
ZNF646
Uncharacterized protein.
    
 
 0.562
DACH1
Dachshund family transcription factor 1.
      
 0.530
IRX1
Iroquois homeobox 1.
   
 
 0.528
MEIS1
Meis homeobox 1.
    
 
 0.491
MEIS2
Meis homeobox 2.
    
 
 0.491
IRX5
Iroquois homeobox 5.
   
 
 0.490
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.