Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CA13Carbonic anhydrase 13; Belongs to the alpha-carbonic anhydrase family. (253 aa)    
Predicted Functional Partners:
CABIN1
Calcineurin binding protein 1.
   
  
 0.887
CA7
Carbonic anhydrase 7; Belongs to the alpha-carbonic anhydrase family.
     
  0.798
STK40
Serine/threonine kinase 40.
      
 0.791
HBZ
Hemoglobin subunit zeta; Belongs to the globin family.
   
  
 0.667
LOC102345863
Anion exchange protein.
   
 
 0.666
SLC4A3
Anion exchange protein.
   
 
 0.666
SLC4A1
Anion exchange protein.
   
 
 0.666
LOC102347143
Uncharacterized protein.
    
 
 0.624
RORB
RAR related orphan receptor B.
      
 0.592
RPF2
Ribosome production factor 2 homolog.
   
 
 0.582
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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