STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM2D2TM2 domain containing 2. (209 aa)    
Predicted Functional Partners:
TM2D1
TM2 domain containing 1.
   
  
 0.707
NHLRC2
NHL repeat containing 2.
      
 0.687
DRG2
Developmentally regulated GTP binding protein 2.
 
      0.685
FAM110A
Family with sequence similarity 110 member A.
      
 0.627
LAMTOR2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
   
  
 0.598
NPRL2
NPR2 like, GATOR1 complex subunit.
   
  
 0.587
PLEKHA2
Pleckstrin homology domain containing A2.
      
 0.555
LAMTOR3
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 3.
      
 0.555
SNAPC5
Small nuclear RNA activating complex, polypeptide 5.
      
 0.553
TRAP1
TNF receptor associated protein 1.
 
      0.546
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.