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ARL6 protein (Latimeria chalumnae) - STRING interaction network
"ARL6" - ADP-ribosylation factor-like 6 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARL6ADP-ribosylation factor-like 6 (186 aa)    
Predicted Functional Partners:
ENSLACG00000004821
Uncharacterized protein (596 aa)
     
  0.890
MYO16
Myosin XVI (786 aa)
     
  0.852
TTC8
Tetratricopeptide repeat domain 8 (534 aa)
     
  0.836
ARFGAP1
ADP-ribosylation factor GTPase activating protein 1 (417 aa)
     
  0.822
BBS7
Bardet-Biedl syndrome 7; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function (715 aa)
     
  0.820
BBS9
Bardet-Biedl syndrome 9 (707 aa)
     
  0.811
BBS4
Bardet-Biedl syndrome 4 (537 aa)
     
  0.808
BBS5
Bardet-Biedl syndrome 5 (342 aa)
     
  0.806
BBS2
Bardet-Biedl syndrome 2 (724 aa)
     
  0.799
GBF1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1 (1912 aa)
     
  0.796
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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