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ABCC9 protein (Latimeria chalumnae) - STRING interaction network
"ABCC9" - ATP-binding cassette, sub-family C in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCC9ATP-binding cassette, sub-family C (CFTR/MRP), member 9 (1555 aa)    
Predicted Functional Partners:
KCNJ8
Potassium inwardly-rectifying channel, subfamily J, member 8 (417 aa)
     
 
  0.926
ENSLACG00000017119
Potassium inwardly-rectifying channel, subfamily J, member 11, like (370 aa)
     
 
  0.825
KCNJ11
Potassium inwardly-rectifying channel, subfamily J, member 11 (392 aa)
     
 
  0.821
ENSLACG00000015384
ATP-binding cassette, sub-family A (ABC1), member 5 (1627 aa)
     
 
  0.654
ABCD4
ATP-binding cassette, sub-family D (ALD), member 4 (438 aa)
       
 
  0.644
USP28
Ubiquitin specific peptidase 28; Belongs to the peptidase C19 family (1060 aa)
     
   
  0.633
JUP
Junction plakoglobin (694 aa)
       
 
  0.616
ABCE1
ATP-binding cassette, sub-family E (OABP), member 1 (600 aa)
     
   
  0.605
KiSS2
Kisspeptin 2 (145 aa)
           
  0.566
KNDC1
Kinase non-catalytic C-lobe domain (KIND) containing 1 (1728 aa)
     
   
  0.555
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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