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ABCC9 protein (Latimeria chalumnae) - STRING interaction network
"ABCC9" - ATP-binding cassette, sub-family C in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCC9ATP-binding cassette, sub-family C (CFTR/MRP), member 9 (1555 aa)    
Predicted Functional Partners:
KCNJ8
Potassium inwardly-rectifying channel, subfamily J, member 8 (417 aa)
     
  0.845
ENSLACG00000017119
Uncharacterized protein (370 aa)
     
  0.784
KCNJ11
Potassium inwardly-rectifying channel, subfamily J, member 11 (392 aa)
     
  0.784
UBA52
Uncharacterized protein (128 aa)
     
  0.714
RAPGEF4
Rap guanine nucleotide exchange factor (GEF) 4 (750 aa)
     
  0.681
RAPGEF3
Rap guanine nucleotide exchange factor (GEF) 3 (376 aa)
       
  0.679
ITSN2
Intersectin 2 (1704 aa)
     
  0.638
ENSLACG00000010044
Uncharacterized protein (1175 aa)
       
  0.635
KXD1
Ubiquitin A-52 residue ribosomal protein fusion product 1 (231 aa)
     
  0.614
DNAJC6
DnaJ (Hsp40) homolog, subfamily C, member 6 (993 aa)
     
  0.598
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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