FAM78B protein (Latimeria chalumnae) - STRING interaction network

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Known Interactions

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Predicted Interactions

gene neighborhood

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textmining

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protein homology

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[Homology]

Score

FAM78B

Family with sequence similarity 78 member B. (183 aa)

Predicted Functional Partners:

UTP20

0.602

WDR43

0.600

CASK

0.587

RPS6

0.558

UTP4

0.552

RPS7

0.552

NOC4L

0.547

UTP11

0.545

DCAF13

0.545

KRR1

0.543

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CASK	FAM78B	ENSLACP00000011437	ENSLACP00000002256	Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.	Family with sequence similarity 78 member B.	0.587
DCAF13	FAM78B	ENSLACP00000015174	ENSLACP00000002256	DDB1 and CUL4 associated factor 13.	Family with sequence similarity 78 member B.	0.545
DCAF13	KRR1	ENSLACP00000015174	ENSLACP00000003076	DDB1 and CUL4 associated factor 13.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.999
DCAF13	NOC4L	ENSLACP00000015174	ENSLACP00000021123	DDB1 and CUL4 associated factor 13.	Nucleolar complex associated 4 homolog.	0.999
DCAF13	RPS6	ENSLACP00000015174	ENSLACP00000011846	DDB1 and CUL4 associated factor 13.	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	0.996
DCAF13	RPS7	ENSLACP00000015174	ENSLACP00000008805	DDB1 and CUL4 associated factor 13.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.996
DCAF13	UTP11	ENSLACP00000015174	ENSLACP00000007853	DDB1 and CUL4 associated factor 13.	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	0.999
DCAF13	UTP20	ENSLACP00000015174	ENSLACP00000011479	DDB1 and CUL4 associated factor 13.	UTP20 small subunit processome component.	0.999
DCAF13	UTP4	ENSLACP00000015174	ENSLACP00000002932	DDB1 and CUL4 associated factor 13.	UTP4 small subunit processome component.	0.999
DCAF13	WDR43	ENSLACP00000015174	ENSLACP00000014117	DDB1 and CUL4 associated factor 13.	WD repeat domain 43.	0.999
FAM78B	CASK	ENSLACP00000002256	ENSLACP00000011437	Family with sequence similarity 78 member B.	Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.	0.587
FAM78B	DCAF13	ENSLACP00000002256	ENSLACP00000015174	Family with sequence similarity 78 member B.	DDB1 and CUL4 associated factor 13.	0.545
FAM78B	KRR1	ENSLACP00000002256	ENSLACP00000003076	Family with sequence similarity 78 member B.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.543
FAM78B	NOC4L	ENSLACP00000002256	ENSLACP00000021123	Family with sequence similarity 78 member B.	Nucleolar complex associated 4 homolog.	0.547
FAM78B	RPS6	ENSLACP00000002256	ENSLACP00000011846	Family with sequence similarity 78 member B.	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	0.558
FAM78B	RPS7	ENSLACP00000002256	ENSLACP00000008805	Family with sequence similarity 78 member B.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.552
FAM78B	UTP11	ENSLACP00000002256	ENSLACP00000007853	Family with sequence similarity 78 member B.	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	0.545
FAM78B	UTP20	ENSLACP00000002256	ENSLACP00000011479	Family with sequence similarity 78 member B.	UTP20 small subunit processome component.	0.602
FAM78B	UTP4	ENSLACP00000002256	ENSLACP00000002932	Family with sequence similarity 78 member B.	UTP4 small subunit processome component.	0.552
FAM78B	WDR43	ENSLACP00000002256	ENSLACP00000014117	Family with sequence similarity 78 member B.	WD repeat domain 43.	0.600