Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2ZXZ8_LATCHUncharacterized protein. (1044 aa)    
Predicted Functional Partners:
GPSM2
G protein signaling modulator 2, like.
    
 
 0.954
LRIT1
Leucine rich repeat, Ig-like and transmembrane domains 1.
     
 0.895
GPSM1
G protein signaling modulator 1.
    
 
 0.867
ARL3
ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.
    
 
 0.811
TMEM51
Transmembrane protein 51.
      
 0.691
SPATS2L
Spermatogenesis associated serine rich 2 like.
      
 0.685
FBXO10
F-box protein 10.
    
 
 0.678
SUB1
SUB1 regulator of transcription.
      
 0.658
GCNA
Germ cell nuclear acidic peptidase.
   
  
 0.649
LOC102349316
Solute carrier family 25 member 51a; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.641
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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