STRINGSTRING
FILIP1 protein (Latimeria chalumnae) - STRING interaction network
"FILIP1" - Filamin A interacting protein 1 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FILIP1Filamin A interacting protein 1 (1181 aa)    
Predicted Functional Partners:
TMEM30A
Transmembrane protein 30A (375 aa)
           
  0.515
CLDN20
Claudin 20; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium- independent cell-adhesion activity (221 aa)
           
  0.499
TMEM30C
Transmembrane protein 30C (352 aa)
           
  0.455
TMEM30B
Transmembrane protein 30B (341 aa)
           
  0.455
WHAMM
WAS protein homolog associated with actin, golgi membranes and microtubules (768 aa)
           
  0.454
JMY
Junction mediating and regulatory protein, p53 cofactor (864 aa)
           
  0.454
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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