• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
LRCH2 protein (Latimeria chalumnae) - STRING interaction network
"LRCH2" - Leucine-rich repeats and calponin homology in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRCH2Leucine-rich repeats and calponin homology (CH) domain containing 2 (618 aa)    
Predicted Functional Partners:
DOCK8
Dedicator of cytokinesis 8; Belongs to the DOCK family (2039 aa)
     
 
  0.796
ENSLACG00000001844
Trafficking protein, kinesin binding 1 (853 aa)
           
  0.784
LRCH3
Leucine-rich repeats and calponin homology (CH) domain containing 3 (835 aa)
       
 
0.678
HAP1
Si-dkey-28e7.3; Huntingtin-associated protein 1 (942 aa)
           
  0.671
FGFBP3
Fibroblast growth factor binding protein 3 (239 aa)
           
  0.655
TMLHE
Trimethyllysine hydroxylase, epsilon (421 aa)
       
 
  0.646
ANKH
Uncharacterized protein; Ankylosis, progressive homolog b (244 aa)
           
  0.646
PSMD10
Proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 (234 aa)
     
 
  0.615
TMEM64
Transmembrane protein 64 (350 aa)
           
  0.591
LPHN3
Adhesion G protein-coupled receptor L3; Latrophilin 3; Belongs to the G-protein coupled receptor 2 family (1416 aa)
       
      0.568
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
Server load: low (13%) [HD]