Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABCB5ATP binding cassette subfamily B member 5. (1243 aa)    
Predicted Functional Partners:
RUNDC3B
RUN domain containing 3B.
   
  
 0.670
ABCE1
ATP binding cassette subfamily E member 1.
   
  
 0.667
SLC25A40
Solute carrier family 25 member 40; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.660
ABCA5
ATP binding cassette subfamily A member 5.
   
0.643
ABCA12
ATP binding cassette subfamily A member 12.
   
 0.637
TJP2
Tight junction protein 2a (zona occludens 2).
      
 0.594
MARCHF6
Membrane associated ring-CH-type finger 6.
   
 
 0.575
ABCB7
ATP binding cassette subfamily B member 7.
    
0.573
SP4
Sp4 transcription factor.
    
 
 0.567
ABCF2
ATP-binding cassette, sub-family F (GCN20), member 2b.
   
 
 0.561
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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