STRINGSTRING
ABCB5 protein (Latimeria chalumnae) - STRING interaction network
"ABCB5" - ATP-binding cassette, sub-family B in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCB5ATP-binding cassette, sub-family B (MDR/TAP), member 5 (1243 aa)    
Predicted Functional Partners:
ABCB1
Multidrug resistance protein 1 (1161 aa)
   
   
0.805
HSP90AA1
Heat shock protein 90kDa alpha (cytosolic), class A member 1 (725 aa)
     
 
  0.804
HSP90AB1
Heat shock protein 90kDa alpha (cytosolic), class B member 1 (734 aa)
     
 
  0.804
ENSLACG00000000733
Uncharacterized protein (730 aa)
     
 
  0.804
ENSLACG00000002183
Uncharacterized protein (385 aa)
     
   
  0.733
UBA52
Uncharacterized protein (128 aa)
     
  0.717
KXD1
Ubiquitin A-52 residue ribosomal protein fusion product 1 (231 aa)
     
  0.613
PAICS
Phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase (1029 aa)
   
  0.571
TOP2A
Topoisomerase (DNA) II alpha 170kDa; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1569 aa)
     
   
  0.569
TOP2B
Topoisomerase (DNA) II beta 180kDa; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1615 aa)
     
   
  0.569
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
Server load: low (9%) [HD]