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STRINGSTRING
BAZ2B protein (Latimeria chalumnae) - STRING interaction network
"BAZ2B" - Bromodomain adjacent to zinc finger domain, 2B in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAZ2BBromodomain adjacent to zinc finger domain, 2B (2134 aa)    
Predicted Functional Partners:
JMJD1C
Jumonji domain containing 1C (2422 aa)
     
 
  0.674
POLE3
Polymerase (DNA directed), epsilon 3 (p17 subunit) (170 aa)
     
 
  0.664
SETDB2
SET domain, bifurcated 2 (751 aa)
     
 
  0.661
SMARCA1
Uncharacterized protein; SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 (1033 aa)
     
 
  0.618
SMARCA5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 (1017 aa)
     
 
  0.618
USP32
Ubiquitin specific peptidase 32; Belongs to the peptidase C19 family (1572 aa)
     
 
  0.596
BPTF
Bromodomain PHD finger transcription factor (3013 aa)
     
 
0.581
HELLS
Helicase, lymphoid-specific (874 aa)
     
 
  0.573
CHD1L
Chromodomain helicase DNA binding protein 1-like (1017 aa)
     
 
  0.573
ZBTB38
Zinc finger and BTB domain containing 38 (1178 aa)
     
 
  0.551
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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