STRINGSTRING
SLITRK6 protein (Latimeria chalumnae) - STRING interaction network
"SLITRK6" - SLIT and NTRK-like family, member 6 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLITRK6SLIT and NTRK-like family, member 6 (841 aa)    
Predicted Functional Partners:
PTPRS
Protein tyrosine phosphatase, receptor type, S (1941 aa)
     
      0.616
PTPRF
Protein tyrosine phosphatase, receptor type, F (1693 aa)
     
      0.616
PTPRD
Protein tyrosine phosphatase, receptor type, D (1903 aa)
     
      0.616
PTPRE
Protein tyrosine phosphatase, receptor type, E (701 aa)
     
      0.525
PTPRG
Protein tyrosine phosphatase, receptor type, G (1221 aa)
     
      0.525
PTPRA
Protein tyrosine phosphatase, receptor type, A (800 aa)
     
      0.525
PTPRC
Protein tyrosine phosphatase, receptor type, C (830 aa)
     
      0.525
PTPRZ1
Protein tyrosine phosphatase, receptor-type, Z polypeptide 1 (2273 aa)
     
      0.525
PTPRQ
Protein tyrosine phosphatase, receptor type, Q (1795 aa)
     
      0.431
ENSLACG00000022532
Uncharacterized protein (465 aa)
     
      0.429
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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