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BCAT2 protein (Latimeria chalumnae) - STRING interaction network
"BCAT2" - Branched chain amino-acid transaminase 2, mitochondrial in Latimeria chalumnae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCAT2Branched chain amino-acid transaminase 2, mitochondrial (417 aa)    
Predicted Functional Partners:
BCKDHA
Branched chain keto acid dehydrogenase E1, alpha polypeptide (446 aa)
   
  0.934
BCKDHB
Branched chain keto acid dehydrogenase E1, beta polypeptide (217 aa)
   
  0.933
CTH
Cystathionase (cystathionine gamma-lyase) (410 aa)
     
  0.920
ENSLACG00000000234
Uncharacterized protein (189 aa)
     
  0.920
GCLM
Glutamate-cysteine ligase, modifier subunit (274 aa)
     
 
  0.905
GCLC
Glutamate-cysteine ligase, catalytic subunit (655 aa)
     
 
  0.903
SDSL
Serine dehydratase-like (325 aa)
   
 
  0.858
ENSLACG00000015905
L-lactate dehydrogenase (333 aa)
     
 
  0.839
ENSLACG00000010504
L-lactate dehydrogenase (362 aa)
     
 
  0.839
LDHB
Lactate dehydrogenase B (361 aa)
     
 
  0.839
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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