STRINGSTRING
ERC2 protein (Latimeria chalumnae) - STRING interaction network
"ERC2" - ELKS/RAB6-interacting/CAST family member 2 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERC2ELKS/RAB6-interacting/CAST family member 2 (153 aa)    
Predicted Functional Partners:
EIF1AY
Eukaryotic translation initiation factor 1A, X-chromosomal (82 aa)
       
      0.728
NLK
Nemo-like kinase (382 aa)
     
      0.710
ENSLACG00000006362
Uncharacterized protein (336 aa)
     
      0.710
TMCC1
Transmembrane and coiled-coil domain family 1 (457 aa)
     
   
  0.430
TMCC3
Transmembrane and coiled-coil domain family 3 (480 aa)
     
   
  0.430
ATP2B4
ATPase, Ca++ transporting, plasma membrane 4; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium (1233 aa)
     
   
  0.429
PRICKLE1
Prickle homolog 1 (Drosophila) (835 aa)
           
  0.428
PRICKLE2
Prickle homolog 2 (Drosophila) (837 aa)
           
  0.428
RIMS1
Regulating synaptic membrane exocytosis 1 (1125 aa)
     
 
  0.420
RIMS4
Regulating synaptic membrane exocytosis 4 (191 aa)
     
 
  0.420
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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