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STRINGSTRING
ERC2 protein (Latimeria chalumnae) - STRING interaction network
"ERC2" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERC2Uncharacterized protein; ELKS/RAB6-interacting/CAST family member 2 (153 aa)    
Predicted Functional Partners:
RAD54L2
RAD54-like 2 (S. cerevisiae) (1451 aa)
     
   
  0.767
RIMS1
Regulating synaptic membrane exocytosis 1 (1125 aa)
     
 
  0.718
TUBGCP2
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome (908 aa)
           
  0.657
CACNA2D3
Calcium channel, voltage-dependent, alpha 2/delta subunit 3 (999 aa)
     
   
  0.651
BSN
Bassoon presynaptic cytomatrix protein (3467 aa)
     
 
  0.646
EPRS
Glutamyl-prolyl-tRNA synthetase (1965 aa)
           
  0.642
SYDE2
Synapse defective 1, Rho GTPase, homolog 2 (C. elegans) (952 aa)
     
   
  0.637
PCNT
Pericentrin (3089 aa)
           
  0.627
PPFIA3
PTPRF interacting protein alpha 3; Protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 (1265 aa)
     
 
  0.626
TMCC3
Transmembrane and coiled-coil domain family 3 (480 aa)
           
  0.609
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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