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ATAD2B protein (Latimeria chalumnae) - STRING interaction network
"ATAD2B" - ATPase family, AAA domain containing 2B in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATAD2BATPase family, AAA domain containing 2B (1395 aa)    
Predicted Functional Partners:
PSMD4
Uncharacterized protein; Phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, a (878 aa)
     
 
  0.786
BTAF1
BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (1848 aa)
     
      0.779
UBR1
Ubiquitin protein ligase E3 component n-recognin 1 (1724 aa)
     
 
  0.779
BRD9
Bromodomain containing 9 (630 aa)
     
   
  0.774
TP53BP1
Tumor protein p53 binding protein 1 (2149 aa)
     
 
  0.747
KXD1
annotation not available (231 aa)
     
 
  0.737
MYSM1
Myb-like, SWIRM and MPN domains 1 (827 aa)
     
 
  0.718
CEP350
Centrosomal protein 350kDa (3149 aa)
     
        0.696
BRD7
Bromodomain containing 7 (638 aa)
     
   
  0.663
BIVM
Basic, immunoglobulin-like variable motif containing (502 aa)
           
  0.647
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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