Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
NEDD9Neural precursor cell expressed, developmentally down-regulated 9. (901 aa)    
Predicted Functional Partners:
CRK
CRK proto-oncogene, adaptor protein.
    
 0.959
LOC102364341
Uncharacterized protein.
    
 0.951
CRKL
CRK like proto-oncogene, adaptor protein.
    
 0.951
LUM
Lumican.
    
 
 0.931
BCAR1
BCAR1 scaffold protein, Cas family member.
    
   0.929
GRIN3A
Glutamate ionotropic receptor NMDA type subunit 3A.
      
 0.927
PTK2B
Protein tyrosine kinase 2 beta; Belongs to the protein kinase superfamily. Tyr protein kinase family.
   
 0.877
PTK2
Protein tyrosine kinase 2; Belongs to the protein kinase superfamily. Tyr protein kinase family.
   
 0.877
CIB3
Calcium and integrin binding family member 3.
   
 0.872
CRADD
CASP2 and RIPK1 domain containing adaptor with death domain.
      
 0.864
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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