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NAGPA protein (Latimeria chalumnae) - STRING interaction network
"NAGPA" - N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAGPAN-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase (588 aa)    
Predicted Functional Partners:
KNTC1
Kinetochore associated 1 (2225 aa)
           
  0.625
GNPTG
N-acetylglucosamine-1-phosphate transferase, gamma subunit (310 aa)
     
   
  0.587
FBXO47
F-box protein 47 (451 aa)
           
  0.585
GNPTAB
N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits (1259 aa)
     
   
  0.552
MDFIC
MyoD family inhibitor domain containing (250 aa)
           
  0.548
MRPL49
Mitochondrial ribosomal protein L49 (164 aa)
           
  0.536
OMP
Olfactory marker protein (159 aa)
           
  0.496
PHF5A
PHD finger protein 5A (93 aa)
           
  0.458
TCF23
Transcription factor 23 (108 aa)
           
  0.456
NIN
Ninein (GSK3B interacting protein) (2098 aa)
           
  0.415
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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