STRINGSTRING
DCPS protein (Latimeria chalumnae) - STRING interaction network
"DCPS" - Decapping enzyme, scavenger in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCPSDecapping enzyme, scavenger (174 aa)    
Predicted Functional Partners:
XRN1
5’-3’ exoribonuclease 1 (1737 aa)
     
 
  0.720
NDOR1
NADPH dependent diflavin oxidoreductase 1; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis. Transfers electrons from NADPH to the Fe/S cluster of CIAPIN1 (597 aa)
     
   
  0.620
ESRP2
Epithelial splicing regulatory protein 2 (721 aa)
       
      0.582
ESRP1
Epithelial splicing regulatory protein 1 (685 aa)
       
      0.582
ENSLACG00000015723
Uncharacterized protein (126 aa)
     
   
  0.536
HINT1
Histidine triad nucleotide binding protein 1 (118 aa)
     
   
  0.536
HINT2
Histidine triad nucleotide binding protein 2 (163 aa)
     
   
  0.524
XRN2
5’-3’ exoribonuclease 2 (921 aa)
     
 
  0.524
TREH
Trehalase (brush-border membrane glycoprotein) (617 aa)
     
 
  0.515
PARN
poly(A)-specific ribonuclease (529 aa)
     
   
  0.493
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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