STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUFT1Uncharacterized protein. (318 aa)    
Predicted Functional Partners:
FAM49B
Family with sequence similarity 49 member B.
      
 0.740
TASP1
Taspase 1.
      
 0.729
TFIP11
Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Belongs to the TFP11/STIP family.
    
 
 0.710
H3A5Z5_LATCH
Hyaluronan and proteoglycan link protein 2.
      
 0.577
LOC102345683
Opticin.
      
 0.540
ZFR
Zinc finger RNA binding protein.
      
 0.533
FMOD
Fibromodulin.
      
 0.507
EPYC
Epiphycan.
      
 0.504
PRELP
Proline and arginine rich end leucine rich repeat protein.
      
 0.500
OMD
Osteomodulin.
      
 0.499
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.