STRINGSTRING
TYRP1 protein (Latimeria chalumnae) - STRING interaction network
"TYRP1" - Tyrosinase-related protein 1 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TYRP1Tyrosinase-related protein 1 (536 aa)    
Predicted Functional Partners:
DCT
Dopachrome tautomerase (521 aa)
     
 
0.910
MITF
Microphthalmia-associated transcription factor (486 aa)
     
   
  0.579
PMEL
Premelanosome protein (766 aa)
     
   
  0.530
GPNMB
Glycoprotein (transmembrane) nmb (607 aa)
     
   
  0.463
PAICS
Phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase (1029 aa)
     
   
  0.458
SLC45A2
Solute carrier family 45, member 2 (411 aa)
     
   
  0.443
SLC24A5
Solute carrier family 24, member 5 (572 aa)
     
   
  0.437
AZI1
5-azacytidine induced 1 (1092 aa)
           
  0.429
SHROOM2
Shroom family member 2 (1749 aa)
           
  0.420
LGI3
Leucine-rich repeat LGI family, member 3 (543 aa)
           
  0.420
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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