STRINGSTRING
DEGS2 protein (Latimeria chalumnae) - STRING interaction network
"DEGS2" - Delta(4)-desaturase, sphingolipid 2 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DEGS2Delta(4)-desaturase, sphingolipid 2 (322 aa)    
Predicted Functional Partners:
CERS3
Ceramide synthase 3 (349 aa)
     
 
  0.948
CERS2
Ceramide synthase 2 (377 aa)
     
 
  0.948
CERS5
Ceramide synthase 5 (392 aa)
     
 
  0.948
CERS1
Ceramide synthase 1 (282 aa)
     
 
  0.946
PPAP2C
Phosphatidic acid phosphatase type 2C (285 aa)
     
 
  0.907
ENSLACG00000008741
Uncharacterized protein (329 aa)
     
 
  0.907
PPAP2A
Phosphatidic acid phosphatase type 2A (283 aa)
     
 
  0.907
PPAP2B
Phosphatidic acid phosphatase type 2B (285 aa)
     
 
  0.907
GBA2
Glucosidase, beta (bile acid) 2; Non-lysosomal glucosylceramidase that catalyzes the conversion of glucosylceramide to free glucose and ceramide (855 aa)
         
  0.907
GBA
Glucosidase, beta, acid (517 aa)
     
 
  0.905
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
Server load: low (15%) [HD]