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STRINGSTRING
ENSLACG00000002114 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000002114" - Si:dkey-199f5.8 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000002114Si-dkey-199f5.8 (266 aa)    
Predicted Functional Partners:
TAF11
TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa (209 aa)
     
   
  0.653
MGAT5B
Mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B (649 aa)
     
   
  0.648
PRDX4
Peroxiredoxin 4 (269 aa)
           
  0.630
RARS
arginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family (660 aa)
           
  0.594
MGAT4B
Mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B (516 aa)
     
   
  0.539
PRELP
Proline/arginine-rich end leucine-rich repeat protein (374 aa)
           
  0.525
MANEA
Mannosidase, endo-alpha (446 aa)
           
  0.507
MANEAL
Mannosidase, endo-alpha-like (432 aa)
           
  0.507
SLC35D1
Solute carrier family 35 (UDP-GlcA/UDP-GalNAc transporter), member D1 (353 aa)
     
   
  0.490
ST6GAL2
ST6 beta-galactosamide alpha-2,6-sialyltranferase 2 (509 aa)
     
   
  0.450
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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