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RPP25L protein (Latimeria chalumnae) - STRING interaction network
"RPP25L" - Ribonuclease P/MRP 25kDa subunit-like in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPP25LRibonuclease P/MRP 25kDa subunit-like (199 aa)    
Predicted Functional Partners:
POP4
Processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae) (222 aa)
     
  0.974
RPP21
Ribonuclease P 21 subunit (157 aa)
     
  0.965
RPP40
Ribonuclease P/MRP 40kDa subunit (361 aa)
     
  0.961
SNX13
Sorting nexin 13 (960 aa)
     
   
  0.951
POP5
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5’-ends. Also a component of RNase MRP (162 aa)
     
  0.943
RPP30
Ribonuclease P/MRP 30kDa subunit (229 aa)
     
 
  0.906
POP7
Ribonuclease P protein subunit p20; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5’-ends. Also a component of RNase MRP complex, which cleaves pre-rRNA sequences (141 aa)
     
  0.901
HEPACAM2
HEPACAM family member 2 (382 aa)
           
  0.890
POP1
Processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae) (966 aa)
     
    0.869
RER1
Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment (217 aa)
     
   
  0.862
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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